close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85572.1Putative heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456. (437 aa)    
Predicted Functional Partners:
AEF85761.1
Conserved hypothetical protein.
 
    0.981
AEF84234.1
Amidohydrolase family protein.
       0.786
raiA
Ribosomal subunit interface protein; Identified by match to protein family HMM TIGR00741.
 
     0.653
AEF84867.1
ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
   
 0.565
AEF84987.1
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.553
AEF85246.1
Conserved hypothetical protein.
  
     0.545
AEF85912.1
PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229.
       0.535
AEF84866.1
Identified by match to protein family HMM PF02554.
       0.534
AEF83746.1
Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639.
  
     0.514
AEF85696.1
Identified by match to protein family HMM PF02878.
 
    0.510
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.