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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84234.1Amidohydrolase family protein. (282 aa)    
Predicted Functional Partners:
AEF85761.1
Conserved hypothetical protein.
       0.793
AEF85572.1
Putative heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456.
       0.786
AEF85925.1
Conserved hypothetical protein.
  
     0.704
AEF86233.1
Acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma; Identified by match to protein family HMM PF03599; match to protein family HMM PF04060.
  
     0.648
AEF84841.1
CO dehydrogenase/acetyl-CoA synthase delta subunit.
  
     0.641
AEF85971.1
Acetyl-CoA synthase; Identified by match to protein family HMM PF03598; match to protein family HMM TIGR00316.
  
     0.638
AEF83878.1
Carbon monoxide dehydrogenase accessory protein CooC; Identified by match to protein family HMM PF01656.
  
     0.577
AEF85349.1
Cobyrinic Acid a,c-diamide synthase; Identified by match to protein family HMM PF01656.
  
     0.576
cooS
Carbon-monoxide dehydrogenase, catalytic subunit; Identified by match to protein family HMM PF03063; match to protein family HMM TIGR01702.
  
     0.563
AEF85912.1
PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229.
  
    0.541
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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