STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEF85133.1Hypothetical protein; Identified by glimmer; putative. (1039 aa)    
Predicted Functional Partners:
AEF86136.1
Phosphoglycolate phosphatase; Identified by match to protein family HMM PF00702.
 
     0.875
AEF84378.1
Conserved hypothetical protein.
       0.794
AEF85390.1
Conserved hypothetical protein.
 
   
 0.790
AEF84520.1
Hypothetical protein; Identified by glimmer; putative.
 
 
 0.788
AEF83606.1
Putative cell division protein FtsQ; Essential cell division protein.
 
    0.782
AEF83657.1
Conserved hypothetical protein.
  
   0.781
AEF85932.1
Identified by match to protein family HMM PF00691.
  
   
 0.779
AEF86875.1
Tetratricopeptide repeat domain protein.
 
     0.777
AEF83581.1
Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464.
 
   
 0.777
AEF84981.1
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
 
     0.777
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.