STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86136.1Phosphoglycolate phosphatase; Identified by match to protein family HMM PF00702. (221 aa)    
Predicted Functional Partners:
AEF83708.1
HAD-superfamily hydrolase, subfamily IA, variant 1; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549.
  
  
 
0.910
AEF86997.1
Pyrophosphatase PpaX.
    
 0.904
AEF85025.1
Phosphoglycolate phosphatase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509.
    
 0.904
AEF85133.1
Hypothetical protein; Identified by glimmer; putative.
 
     0.876
AEF84378.1
Conserved hypothetical protein.
       0.792
AEF87028.1
Class I peptide chain release factor.
  
    0.530
AEF83579.1
Putative tyrosinase; Identified by match to protein family HMM PF04151.
       0.511
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
 
    0.494
AEF84547.1
Hypothetical protein; Identified by glimmer; putative.
       0.441
AEF84520.1
Hypothetical protein; Identified by glimmer; putative.
  
    0.425
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.