Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83806.1 | AEF83878.1 | TREPR_3071 | TREPR_3068 | Ferredoxin; Identified by match to protein family HMM PF00111. | Carbon monoxide dehydrogenase accessory protein CooC; Identified by match to protein family HMM PF01656. | 0.858 |
| AEF83806.1 | AEF84093.1 | TREPR_3071 | TREPR_1045 | Ferredoxin; Identified by match to protein family HMM PF00111. | Hypothetical protein; Identified by glimmer; putative. | 0.550 |
| AEF83806.1 | AEF84841.1 | TREPR_3071 | TREPR_3066 | Ferredoxin; Identified by match to protein family HMM PF00111. | CO dehydrogenase/acetyl-CoA synthase delta subunit. | 0.949 |
| AEF83806.1 | AEF85264.1 | TREPR_3071 | TREPR_1556 | Ferredoxin; Identified by match to protein family HMM PF00111. | Methyl corrinoid protein; Identified by match to protein family HMM PF00809. | 0.594 |
| AEF83806.1 | AEF85349.1 | TREPR_3071 | TREPR_3132 | Ferredoxin; Identified by match to protein family HMM PF00111. | Cobyrinic Acid a,c-diamide synthase; Identified by match to protein family HMM PF01656. | 0.750 |
| AEF83806.1 | AEF85654.1 | TREPR_3071 | TREPR_3545 | Ferredoxin; Identified by match to protein family HMM PF00111. | Carbon monoxide dehydrogenase accessory protein CooC; Identified by match to protein family HMM PF01656. | 0.704 |
| AEF83806.1 | AEF85971.1 | TREPR_3071 | TREPR_3067 | Ferredoxin; Identified by match to protein family HMM PF00111. | Acetyl-CoA synthase; Identified by match to protein family HMM PF03598; match to protein family HMM TIGR00316. | 0.875 |
| AEF83806.1 | AEF86233.1 | TREPR_3071 | TREPR_3065 | Ferredoxin; Identified by match to protein family HMM PF00111. | Acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma; Identified by match to protein family HMM PF03599; match to protein family HMM PF04060. | 0.948 |
| AEF83806.1 | AEF87044.1 | TREPR_3071 | TREPR_2899 | Ferredoxin; Identified by match to protein family HMM PF00111. | Conserved hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family. | 0.570 |
| AEF83878.1 | AEF83806.1 | TREPR_3068 | TREPR_3071 | Carbon monoxide dehydrogenase accessory protein CooC; Identified by match to protein family HMM PF01656. | Ferredoxin; Identified by match to protein family HMM PF00111. | 0.858 |
| AEF83878.1 | AEF84093.1 | TREPR_3068 | TREPR_1045 | Carbon monoxide dehydrogenase accessory protein CooC; Identified by match to protein family HMM PF01656. | Hypothetical protein; Identified by glimmer; putative. | 0.653 |
| AEF83878.1 | AEF84841.1 | TREPR_3068 | TREPR_3066 | Carbon monoxide dehydrogenase accessory protein CooC; Identified by match to protein family HMM PF01656. | CO dehydrogenase/acetyl-CoA synthase delta subunit. | 0.924 |
| AEF83878.1 | AEF85971.1 | TREPR_3068 | TREPR_3067 | Carbon monoxide dehydrogenase accessory protein CooC; Identified by match to protein family HMM PF01656. | Acetyl-CoA synthase; Identified by match to protein family HMM PF03598; match to protein family HMM TIGR00316. | 0.975 |
| AEF83878.1 | AEF86233.1 | TREPR_3068 | TREPR_3065 | Carbon monoxide dehydrogenase accessory protein CooC; Identified by match to protein family HMM PF01656. | Acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma; Identified by match to protein family HMM PF03599; match to protein family HMM PF04060. | 0.909 |
| AEF84093.1 | AEF83806.1 | TREPR_1045 | TREPR_3071 | Hypothetical protein; Identified by glimmer; putative. | Ferredoxin; Identified by match to protein family HMM PF00111. | 0.550 |
| AEF84093.1 | AEF83878.1 | TREPR_1045 | TREPR_3068 | Hypothetical protein; Identified by glimmer; putative. | Carbon monoxide dehydrogenase accessory protein CooC; Identified by match to protein family HMM PF01656. | 0.653 |
| AEF84093.1 | AEF84841.1 | TREPR_1045 | TREPR_3066 | Hypothetical protein; Identified by glimmer; putative. | CO dehydrogenase/acetyl-CoA synthase delta subunit. | 0.966 |
| AEF84093.1 | AEF84856.1 | TREPR_1045 | TREPR_1046 | Hypothetical protein; Identified by glimmer; putative. | 4Fe-4S ferredoxin, iron-sulfur binding protein. | 0.631 |
| AEF84093.1 | AEF85264.1 | TREPR_1045 | TREPR_1556 | Hypothetical protein; Identified by glimmer; putative. | Methyl corrinoid protein; Identified by match to protein family HMM PF00809. | 0.589 |
| AEF84093.1 | AEF85349.1 | TREPR_1045 | TREPR_3132 | Hypothetical protein; Identified by glimmer; putative. | Cobyrinic Acid a,c-diamide synthase; Identified by match to protein family HMM PF01656. | 0.664 |
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