Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83981.1 | AEF84704.1 | TREPR_1053 | TREPR_1054 | Major membrane immunogen. | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | 0.746 |
| AEF83981.1 | AEF84867.1 | TREPR_1053 | TREPR_0974 | Major membrane immunogen. | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.531 |
| AEF83981.1 | AEF85501.1 | TREPR_1053 | TREPR_2002 | Major membrane immunogen. | Putative membrane protein. | 0.483 |
| AEF83981.1 | AEF85718.1 | TREPR_1053 | TREPR_1055 | Major membrane immunogen. | Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.746 |
| AEF83981.1 | AEF86937.1 | TREPR_1053 | TREPR_1052 | Major membrane immunogen. | Putative lipoprotein. | 0.773 |
| AEF83981.1 | tpx | TREPR_1053 | TREPR_1050 | Major membrane immunogen. | Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 0.520 |
| AEF84704.1 | AEF83981.1 | TREPR_1054 | TREPR_1053 | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | Major membrane immunogen. | 0.746 |
| AEF84704.1 | AEF85718.1 | TREPR_1054 | TREPR_1055 | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.774 |
| AEF84704.1 | AEF86937.1 | TREPR_1054 | TREPR_1052 | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | Putative lipoprotein. | 0.815 |
| AEF84704.1 | tpx | TREPR_1054 | TREPR_1050 | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 0.517 |
| AEF84867.1 | AEF83981.1 | TREPR_0974 | TREPR_1053 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Major membrane immunogen. | 0.531 |
| AEF85501.1 | AEF83981.1 | TREPR_2002 | TREPR_1053 | Putative membrane protein. | Major membrane immunogen. | 0.483 |
| AEF85718.1 | AEF83981.1 | TREPR_1055 | TREPR_1053 | Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Major membrane immunogen. | 0.746 |
| AEF85718.1 | AEF84704.1 | TREPR_1055 | TREPR_1054 | Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | 0.774 |
| AEF85718.1 | AEF86937.1 | TREPR_1055 | TREPR_1052 | Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Putative lipoprotein. | 0.746 |
| AEF85718.1 | tpx | TREPR_1055 | TREPR_1050 | Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 0.504 |
| AEF86937.1 | AEF83981.1 | TREPR_1052 | TREPR_1053 | Putative lipoprotein. | Major membrane immunogen. | 0.773 |
| AEF86937.1 | AEF84704.1 | TREPR_1052 | TREPR_1054 | Putative lipoprotein. | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | 0.815 |
| AEF86937.1 | AEF85718.1 | TREPR_1052 | TREPR_1055 | Putative lipoprotein. | Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.746 |
| AEF86937.1 | tpx | TREPR_1052 | TREPR_1050 | Putative lipoprotein. | Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 0.520 |
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