AEF84651.1 protein (Treponema primitia ZAS2)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AEF84651.1

Putative tetratricopeptide TPR_2; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. (521 aa)

Predicted Functional Partners:

AEF85896.1

0.850

AEF83566.1

0.800

AEF86424.1

0.774

AEF85268.1

0.733

polA

0.710

AEF84723.1

0.698

AEF84075.1

0.691

AEF85044.1

0.689

AEF85322.1

0.686

AEF86947.1

0.660

Your Current Organism:

Treponema primitia ZAS2

NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AEF83566.1	AEF84651.1	TREPR_1104	TREPR_1103	HDOD domain protein; Identified by match to protein family HMM PF08668.	Putative tetratricopeptide TPR_2; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.800
AEF83566.1	AEF85896.1	TREPR_1104	TREPR_1102	HDOD domain protein; Identified by match to protein family HMM PF08668.	Fibronectin type III domain protein; Identified by match to protein family HMM PF00041.	0.800
AEF84075.1	AEF84651.1	TREPR_1856	TREPR_1103	Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Putative tetratricopeptide TPR_2; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.691
AEF84075.1	AEF84723.1	TREPR_1856	TREPR_3861	Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.535
AEF84075.1	AEF85322.1	TREPR_1856	TREPR_2995	Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	NB-ARC domain protein; Identified by match to protein family HMM PF00400; match to protein family HMM PF00656.	0.752
AEF84075.1	AEF86424.1	TREPR_1856	TREPR_2624	Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.516
AEF84075.1	AEF86947.1	TREPR_1856	TREPR_2927	Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Putative ankyrin; Identified by match to protein family HMM PF00023.	0.437
AEF84651.1	AEF83566.1	TREPR_1103	TREPR_1104	Putative tetratricopeptide TPR_2; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	HDOD domain protein; Identified by match to protein family HMM PF08668.	0.800
AEF84651.1	AEF84075.1	TREPR_1103	TREPR_1856	Putative tetratricopeptide TPR_2; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.691
AEF84651.1	AEF84723.1	TREPR_1103	TREPR_3861	Putative tetratricopeptide TPR_2; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.698
AEF84651.1	AEF85044.1	TREPR_1103	TREPR_3597	Putative tetratricopeptide TPR_2; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.689
AEF84651.1	AEF85268.1	TREPR_1103	TREPR_1725	Putative tetratricopeptide TPR_2; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.733
AEF84651.1	AEF85322.1	TREPR_1103	TREPR_2995	Putative tetratricopeptide TPR_2; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	NB-ARC domain protein; Identified by match to protein family HMM PF00400; match to protein family HMM PF00656.	0.686
AEF84651.1	AEF85896.1	TREPR_1103	TREPR_1102	Putative tetratricopeptide TPR_2; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	Fibronectin type III domain protein; Identified by match to protein family HMM PF00041.	0.850
AEF84651.1	AEF86424.1	TREPR_1103	TREPR_2624	Putative tetratricopeptide TPR_2; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.774
AEF84651.1	AEF86947.1	TREPR_1103	TREPR_2927	Putative tetratricopeptide TPR_2; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	Putative ankyrin; Identified by match to protein family HMM PF00023.	0.660
AEF84651.1	polA	TREPR_1103	TREPR_3060	Putative tetratricopeptide TPR_2; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.710
AEF84723.1	AEF84075.1	TREPR_3861	TREPR_1856	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.535
AEF84723.1	AEF84651.1	TREPR_3861	TREPR_1103	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Putative tetratricopeptide TPR_2; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.	0.698
AEF84723.1	AEF85044.1	TREPR_3861	TREPR_3597	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.732

page 1 of 4

Server load: low (14%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About