Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83554.1 | AEF83977.1 | TREPR_1114 | TREPR_1118 | Conserved hypothetical protein. | MscS Mechanosensitive ion channel; Identified by match to protein family HMM PF00924. | 0.517 |
| AEF83554.1 | AEF85184.1 | TREPR_1114 | TREPR_3477 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.403 |
| AEF83554.1 | AEF86818.1 | TREPR_1114 | TREPR_1117 | Conserved hypothetical protein. | Cupin 2, conserved barrel; Identified by match to protein family HMM PF07883. | 0.607 |
| AEF83554.1 | fliL_2 | TREPR_1114 | TREPR_1119 | Conserved hypothetical protein. | Flagellar basal body-associated protein FliL; Identified by match to protein family HMM PF03748. | 0.441 |
| AEF83554.1 | glmS | TREPR_1114 | TREPR_1116 | Conserved hypothetical protein. | Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.615 |
| AEF83977.1 | AEF83554.1 | TREPR_1118 | TREPR_1114 | MscS Mechanosensitive ion channel; Identified by match to protein family HMM PF00924. | Conserved hypothetical protein. | 0.517 |
| AEF83977.1 | AEF86818.1 | TREPR_1118 | TREPR_1117 | MscS Mechanosensitive ion channel; Identified by match to protein family HMM PF00924. | Cupin 2, conserved barrel; Identified by match to protein family HMM PF07883. | 0.566 |
| AEF83977.1 | fliL_2 | TREPR_1118 | TREPR_1119 | MscS Mechanosensitive ion channel; Identified by match to protein family HMM PF00924. | Flagellar basal body-associated protein FliL; Identified by match to protein family HMM PF03748. | 0.773 |
| AEF83977.1 | glmS | TREPR_1118 | TREPR_1116 | MscS Mechanosensitive ion channel; Identified by match to protein family HMM PF00924. | Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.552 |
| AEF85184.1 | AEF83554.1 | TREPR_3477 | TREPR_1114 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.403 |
| AEF86818.1 | AEF83554.1 | TREPR_1117 | TREPR_1114 | Cupin 2, conserved barrel; Identified by match to protein family HMM PF07883. | Conserved hypothetical protein. | 0.607 |
| AEF86818.1 | AEF83977.1 | TREPR_1117 | TREPR_1118 | Cupin 2, conserved barrel; Identified by match to protein family HMM PF07883. | MscS Mechanosensitive ion channel; Identified by match to protein family HMM PF00924. | 0.566 |
| AEF86818.1 | fliL_2 | TREPR_1117 | TREPR_1119 | Cupin 2, conserved barrel; Identified by match to protein family HMM PF07883. | Flagellar basal body-associated protein FliL; Identified by match to protein family HMM PF03748. | 0.549 |
| AEF86818.1 | glmS | TREPR_1117 | TREPR_1116 | Cupin 2, conserved barrel; Identified by match to protein family HMM PF07883. | Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.778 |
| fliL_2 | AEF83554.1 | TREPR_1119 | TREPR_1114 | Flagellar basal body-associated protein FliL; Identified by match to protein family HMM PF03748. | Conserved hypothetical protein. | 0.441 |
| fliL_2 | AEF83977.1 | TREPR_1119 | TREPR_1118 | Flagellar basal body-associated protein FliL; Identified by match to protein family HMM PF03748. | MscS Mechanosensitive ion channel; Identified by match to protein family HMM PF00924. | 0.773 |
| fliL_2 | AEF86818.1 | TREPR_1119 | TREPR_1117 | Flagellar basal body-associated protein FliL; Identified by match to protein family HMM PF03748. | Cupin 2, conserved barrel; Identified by match to protein family HMM PF07883. | 0.549 |
| fliL_2 | glmS | TREPR_1119 | TREPR_1116 | Flagellar basal body-associated protein FliL; Identified by match to protein family HMM PF03748. | Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.542 |
| glmS | AEF83554.1 | TREPR_1116 | TREPR_1114 | Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Conserved hypothetical protein. | 0.615 |
| glmS | AEF83977.1 | TREPR_1116 | TREPR_1118 | Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | MscS Mechanosensitive ion channel; Identified by match to protein family HMM PF00924. | 0.552 |
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