Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEF85342.1Extracellular ligand-binding receptor; Identified by match to protein family HMM PF01094. (396 aa)    
Predicted Functional Partners:
AEF83787.1
High-affinity branched-chain amino acid transport system permease protein LivM; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.995
AEF86348.1
Inner-membrane translocator; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.994
AEF84801.1
Branched-chain amino acid ABC transporter; Identified by match to protein family HMM PF00005.
 
 
 0.994
AEF85219.1
Branched-chain amino acid ABC transporter; Identified by match to protein family HMM PF00005.
 
 
 0.992
AEF85728.1
Inner-membrane translocator; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.981
AEF84530.1
High-affinity branched chain amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.981
AEF83591.1
High affinity branched-chain amino acid ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 0.981
AEF85243.1
Putative inner-membrane translocator; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.981
AEF84357.1
Branched-chain amino acid transport ATP-binding protein LivG; Identified by match to protein family HMM PF00005.
 
 
 0.977
AEF86540.1
High-affinity branched-chain amino acid ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 0.972
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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