STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84922.1TonB family C- domain protein; Identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352. (237 aa)    
Predicted Functional Partners:
AEF83769.1
Biopolymer transport protein; Identified by match to protein family HMM PF01618.
 
 
 0.905
AEF86796.1
TolR protein.
  
 
 0.876
AEF85277.1
Putative biopolymer transport ExbD protein; Identified by match to protein family HMM PF02472.
  
 
 0.876
AEF84955.1
Putative lipoprotein.
  
 
 0.857
AEF85224.1
Putative vitamin B12 transporter BtuB (Cobalamin receptor) (Outermembrane cobalamin translocator); Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
 
 
 
 0.823
AEF86841.1
TonB-dependent receptor plug domain protein; Identified by match to protein family HMM PF07715.
 
 
 
 0.769
AEF85169.1
Putative TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
 
 
 0.735
AEF84757.1
Putative outer membrane protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
 
 
 0.674
AEF86124.1
Periplasmic binding protein; Identified by match to protein family HMM PF01497.
 
  
 0.605
AEF83799.1
Putative TonB-dependent receptor; Identified by match to protein family HMM TIGR01352.
  
     0.600
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.