STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85169.1Putative TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715. (677 aa)    
Predicted Functional Partners:
AEF84922.1
TonB family C- domain protein; Identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352.
 
 
 0.735
AEF86457.1
Fibronectin type III domain protein; Identified by match to protein family HMM PF00041.
       0.618
AEF83799.1
Putative TonB-dependent receptor; Identified by match to protein family HMM TIGR01352.
 
 
 0.582
AEF86124.1
Periplasmic binding protein; Identified by match to protein family HMM PF01497.
 
  
 0.573
AEF85224.1
Putative vitamin B12 transporter BtuB (Cobalamin receptor) (Outermembrane cobalamin translocator); Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
 
   
 0.561
AEF84717.1
Periplasmic binding protein; Identified by match to protein family HMM PF01497.
 
  
 0.544
AEF85396.1
iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF01497.
 
  
 0.538
AEF85399.1
Hemin import ATP-binding protein HmuV; Identified by match to protein family HMM PF00005.
 
  
 0.536
AEF84983.1
iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF01497.
 
  
 0.523
AEF84554.1
TonB protein; Identified by match to protein family HMM TIGR01352.
  
 
 0.508
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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