STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfBElectron transfer flavoprotein, beta subunit; Identified by match to protein family HMM PF01012. (276 aa)    
Predicted Functional Partners:
etfA
Electron transfer flavoprotein, alpha subunit; Identified by match to protein family HMM PF00766; match to protein family HMM PF01012.
 0.999
acd
Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
 
 
 0.996
rnfB
Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.880
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
  
 
 0.880
AEF85443.1
NADH:flavin oxidoreductase/nadh oxidase; Identified by match to protein family HMM PF00724.
 
 
 0.829
AEF85842.1
Dihydroorotate oxidase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01180; match to protein family HMM TIGR01037.
  
 
 0.791
AEF84656.1
Conserved domain protein; Identified by match to protein family HMM PF00037.
   
 
 0.763
AEF84988.1
Glutamate synthase [NADH] (nadh-gogat); Identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01317.
  
 
 0.749
AEF85018.1
NADH dehydrogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512.
  
  
 0.552
hndB3
NAD-dependent formate dehydrogenase beta subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512.
  
  
 0.552
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.