STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
citGProbable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase; Identified by match to protein family HMM PF01874; match to protein family HMM PF03802; match to protein family HMM TIGR03124. (481 aa)    
Predicted Functional Partners:
citD_2
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.991
citF_2
Citrate lyase, alpha subunit; Identified by match to protein family HMM PF04223; match to protein family HMM TIGR01584.
 
  
 0.991
citD_1
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.991
citF_1
Citrate lyase, alpha subunit; Identified by match to protein family HMM PF04223; match to protein family HMM TIGR01584.
 
  
 0.991
citE
Citrate (pro-3S)-lyase, beta subunit; Identified by match to protein family HMM PF03328; match to protein family HMM TIGR01588; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.990
AEF86350.1
Citrate lyase subunit beta / citryl-CoA lyase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.989
citC
[citrate (pro-3S)-lyase] ligase; Identified by match to protein family HMM PF00583; match to protein family HMM PF08218; match to protein family HMM TIGR00124; match to protein family HMM TIGR00125.
 
 0.986
AEF83889.1
Citrate lyase ligase C- domain protein; Identified by match to protein family HMM PF01467; match to protein family HMM PF08218; match to protein family HMM TIGR00125.
 
 0.985
AEF84754.1
Citrate lyase ligase C- domain protein; Identified by match to protein family HMM PF01467; match to protein family HMM PF08218; match to protein family HMM TIGR00125.
 
 0.985
AEF86303.1
Citrate lyase ligase C- domain protein; Identified by match to protein family HMM PF01467; match to protein family HMM PF08218; match to protein family HMM TIGR00125.
 
 0.985
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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