STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85644.1Putative GntR domain protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. (243 aa)    
Predicted Functional Partners:
AEF85604.1
Transcriptional regulator, IclR family; Identified by match to protein family HMM PF01614; match to protein family HMM PF09339.
 
  
 0.648
AEF85002.1
Putative C4-dicarboxylate-binding protein; Identified by match to protein family HMM PF03480; match to protein family HMM TIGR00787.
 
     0.594
AEF87035.1
2-hydroxy-3-oxopropionate reductase; Identified by match to protein family HMM PF03446; match to protein family HMM TIGR01505.
 
     0.554
AEF85819.1
Identified by match to protein family HMM PF01261.
       0.532
AEF84238.1
Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
  
 0.510
AEF87002.1
Trap dicarboxylate transporter, dctm subunit; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786.
 
     0.501
accD_2
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
  
 0.463
accD_1
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
  
 0.463
AEF86853.1
Transcriptional regulator, XRE family with cupin sensor; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883.
  
  
 0.456
AEF83826.1
Transcriptional regulator, XRE family with cupin sensor; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883.
  
  
 0.456
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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