Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84644.1 | AEF85087.1 | TREPR_1339 | TREPR_2660 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | Aldose 1-epimerase (Mutarotase); Converts alpha-aldose to the beta-anomer. | 0.920 |
| AEF84644.1 | AEF85659.1 | TREPR_1339 | TREPR_1681 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | Putative phosphomannomutase; Identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | 0.925 |
| AEF84644.1 | AEF85696.1 | TREPR_1339 | TREPR_2725 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | Identified by match to protein family HMM PF02878. | 0.945 |
| AEF84644.1 | glmS | TREPR_1339 | TREPR_1116 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.916 |
| AEF84644.1 | nagA | TREPR_1339 | TREPR_3359 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | N-acetylglucosamine-6-phosphate deacetylase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221. | 0.922 |
| AEF84644.1 | nagB | TREPR_1339 | TREPR_3358 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | 0.918 |
| AEF84644.1 | pfkA | TREPR_1339 | TREPR_0608 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | Diphosphate--fructose-6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily. | 0.928 |
| AEF84644.1 | pfkA-2 | TREPR_1339 | TREPR_3551 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. | 0.928 |
| AEF84644.1 | pfp | TREPR_1339 | TREPR_1621 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | Diphosphate--fructose-6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.928 |
| AEF84644.1 | pgi | TREPR_1339 | TREPR_2249 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | Glucose-6-phosphate isomerase; Identified by match to protein family HMM PF00342; Belongs to the GPI family. | 0.948 |
| AEF85087.1 | AEF84644.1 | TREPR_2660 | TREPR_1339 | Aldose 1-epimerase (Mutarotase); Converts alpha-aldose to the beta-anomer. | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | 0.920 |
| AEF85659.1 | AEF84644.1 | TREPR_1681 | TREPR_1339 | Putative phosphomannomutase; Identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | 0.925 |
| AEF85659.1 | AEF85696.1 | TREPR_1681 | TREPR_2725 | Putative phosphomannomutase; Identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | Identified by match to protein family HMM PF02878. | 0.900 |
| AEF85659.1 | pgi | TREPR_1681 | TREPR_2249 | Putative phosphomannomutase; Identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | Glucose-6-phosphate isomerase; Identified by match to protein family HMM PF00342; Belongs to the GPI family. | 0.923 |
| AEF85696.1 | AEF84644.1 | TREPR_2725 | TREPR_1339 | Identified by match to protein family HMM PF02878. | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | 0.945 |
| AEF85696.1 | AEF85659.1 | TREPR_2725 | TREPR_1681 | Identified by match to protein family HMM PF02878. | Putative phosphomannomutase; Identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | 0.900 |
| AEF85696.1 | pgi | TREPR_2725 | TREPR_2249 | Identified by match to protein family HMM PF02878. | Glucose-6-phosphate isomerase; Identified by match to protein family HMM PF00342; Belongs to the GPI family. | 0.923 |
| glmS | AEF84644.1 | TREPR_1116 | TREPR_1339 | Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | 0.916 |
| glmS | nagA | TREPR_1116 | TREPR_3359 | Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | N-acetylglucosamine-6-phosphate deacetylase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221. | 0.923 |
| glmS | nagB | TREPR_1116 | TREPR_3358 | Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | 0.916 |
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