STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85151.1Oligopeptide transport ATP-binding protein AppF; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. (335 aa)    
Predicted Functional Partners:
AEF85587.1
Putative oligopeptide ABC transporter substrate-binding protein; Identified by match to protein family HMM PF00496.
 
  0.922
AEF86072.1
Oligopeptide transport system permease protein OppC; Identified by match to protein family HMM PF00528.
 0.900
AEF86664.1
Dipeptide transport system permease protein DppC; Identified by match to protein family HMM PF00528.
 
 0.882
AEF86446.1
Periplasmic murein peptide-binding protein; Identified by match to protein family HMM PF00496.
 
 
 0.878
AEF86236.1
Bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.
 
 
 0.875
AEF84395.1
Oligopeptide transport ATP-binding protein AppD; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
 
   
0.863
AEF84875.1
Oligopeptide transport system permease protein OppB; Identified by match to protein family HMM PF00528.
 
  0.854
AEF85934.1
Probable peptide ABC transporter permease protein y4tP; Identified by match to protein family HMM PF00528.
 
    0.798
AEF84113.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.675
AEF85421.1
Mandelate racemase/muconate lactonizing enzyme family protein; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746.
       0.615
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.