STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84955.1Putative lipoprotein. (221 aa)    
Predicted Functional Partners:
AEF83799.1
Putative TonB-dependent receptor; Identified by match to protein family HMM TIGR01352.
  
 
 0.857
AEF84922.1
TonB family C- domain protein; Identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352.
  
 
 0.857
AEF84554.1
TonB protein; Identified by match to protein family HMM TIGR01352.
  
 
 0.857
AEF85688.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
AEF86262.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
AEF86402.1
Probable extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM PF03781.
    
 
 0.725
AEF83672.1
Probable extracellular nuclease.
    
 
 0.725
AEF84740.1
Parallel beta-helix repeat protein.
    
 
 0.725
AEF85102.1
Hypothetical protein; Identified by glimmer; putative.
    
 
 0.725
AEF84790.1
Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376.
    
 
 0.725
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.