STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86019.1Putative Ig domain family; Identified by match to protein family HMM PF00041; match to protein family HMM PF05345. (4977 aa)    
Predicted Functional Partners:
AEF85239.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
AEF84647.1
Hypothetical protein; Identified by glimmer; putative.
  
     0.740
AEF84547.1
Hypothetical protein; Identified by glimmer; putative.
  
 
 
 0.681
AEF85400.1
Putative BNR domain protein.
  
     0.667
AEF85382.1
Putative lipoprotein.
  
     0.642
AEF86875.1
Tetratricopeptide repeat domain protein.
  
 
 
 0.551
AEF86882.1
Conserved hypothetical protein.
  
     0.532
AEF84028.1
Bacterial type II and III secretion system protein; Identified by match to protein family HMM PF00263; match to protein family HMM PF03958; Belongs to the bacterial secretin family.
 
  
 0.483
AEF83945.1
Peptidase, A24 (type IV prepilin peptidase) family; Identified by match to protein family HMM PF01478.
       0.473
AEF86893.1
Putative lipoprotein.
 
     0.444
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.