Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84162.1 | AEF84345.1 | TREPR_1509 | TREPR_1512 | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | Glycoside hydrolase family 4; Identified by match to protein family HMM PF02056. | 0.587 |
| AEF84162.1 | AEF84401.1 | TREPR_1509 | TREPR_1504 | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | GTP diphosphokinase; Identified by match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691. | 0.570 |
| AEF84162.1 | AEF84889.1 | TREPR_1509 | TREPR_1508 | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | Putative phosphoesterase PHP domain protein. | 0.776 |
| AEF84162.1 | AEF85620.1 | TREPR_1509 | TREPR_1511 | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | Putative ABC transporter, substrate binding protein; Identified by match to protein family HMM PF01547. | 0.783 |
| AEF84162.1 | AEF85629.1 | TREPR_1509 | TREPR_1507 | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | Hypothetical protein; Identified by glimmer; putative. | 0.586 |
| AEF84162.1 | AEF86900.1 | TREPR_1509 | TREPR_1510 | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | ABC transporter permease protein; Identified by match to protein family HMM PF00528. | 0.980 |
| AEF84162.1 | hemK | TREPR_1509 | TREPR_1505 | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.570 |
| AEF84162.1 | prfA | TREPR_1509 | TREPR_1506 | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.598 |
| AEF84345.1 | AEF84162.1 | TREPR_1512 | TREPR_1509 | Glycoside hydrolase family 4; Identified by match to protein family HMM PF02056. | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.587 |
| AEF84345.1 | AEF84401.1 | TREPR_1512 | TREPR_1504 | Glycoside hydrolase family 4; Identified by match to protein family HMM PF02056. | GTP diphosphokinase; Identified by match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691. | 0.443 |
| AEF84345.1 | AEF84889.1 | TREPR_1512 | TREPR_1508 | Glycoside hydrolase family 4; Identified by match to protein family HMM PF02056. | Putative phosphoesterase PHP domain protein. | 0.588 |
| AEF84345.1 | AEF85620.1 | TREPR_1512 | TREPR_1511 | Glycoside hydrolase family 4; Identified by match to protein family HMM PF02056. | Putative ABC transporter, substrate binding protein; Identified by match to protein family HMM PF01547. | 0.686 |
| AEF84345.1 | AEF85629.1 | TREPR_1512 | TREPR_1507 | Glycoside hydrolase family 4; Identified by match to protein family HMM PF02056. | Hypothetical protein; Identified by glimmer; putative. | 0.454 |
| AEF84345.1 | AEF86900.1 | TREPR_1512 | TREPR_1510 | Glycoside hydrolase family 4; Identified by match to protein family HMM PF02056. | ABC transporter permease protein; Identified by match to protein family HMM PF00528. | 0.607 |
| AEF84345.1 | hemK | TREPR_1512 | TREPR_1505 | Glycoside hydrolase family 4; Identified by match to protein family HMM PF02056. | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.443 |
| AEF84345.1 | prfA | TREPR_1512 | TREPR_1506 | Glycoside hydrolase family 4; Identified by match to protein family HMM PF02056. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.454 |
| AEF84401.1 | AEF84162.1 | TREPR_1504 | TREPR_1509 | GTP diphosphokinase; Identified by match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691. | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.570 |
| AEF84401.1 | AEF84345.1 | TREPR_1504 | TREPR_1512 | GTP diphosphokinase; Identified by match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691. | Glycoside hydrolase family 4; Identified by match to protein family HMM PF02056. | 0.443 |
| AEF84401.1 | AEF84889.1 | TREPR_1504 | TREPR_1508 | GTP diphosphokinase; Identified by match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691. | Putative phosphoesterase PHP domain protein. | 0.625 |
| AEF84401.1 | AEF85620.1 | TREPR_1504 | TREPR_1511 | GTP diphosphokinase; Identified by match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691. | Putative ABC transporter, substrate binding protein; Identified by match to protein family HMM PF01547. | 0.492 |
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