STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85806.1Ribose import ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. (502 aa)    
Predicted Functional Partners:
AEF85485.1
Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 0.995
AEF83707.1
Putative sugar ABC-transporter, sugar-binding protein.
 
 0.991
AEF84558.1
Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 0.882
AEF85328.1
Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 0.869
AEF84760.1
Galactoside transport system permease protein MglC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
  
 0.843
AEF85851.1
D-ribose-binding periplasmic protein; Identified by match to protein family HMM PF00532.
 
 
 0.774
AEF85478.1
Periplasmic sugar-binding protein; Identified by match to protein family HMM PF00532.
 
 
 0.757
AEF86391.1
D-galactose-binding periplasmic protein (gbp) (d-galactose/d-glucose-binding protein) (ggbp).
 
 
 0.707
AEF83829.1
L-arabinose ABC transporter; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
  
 0.706
AEF83958.1
Putative methyltransferase CmuC; Belongs to the uroporphyrinogen decarboxylase family.
       0.562
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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