STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85015.1Transglycosylase, SLT family; Identified by match to protein family HMM PF01464; match to protein family HMM PF01476. (466 aa)    
Predicted Functional Partners:
AEF84064.1
Putative OmpA family protein.
   
 
 0.797
AEF85287.1
Conserved hypothetical protein.
       0.668
AEF86996.1
Identified by match to protein family HMM PF00691.
 
 
 
 0.578
AEF84113.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the binding-protein-dependent transport system permease family.
       0.566
AEF86077.1
Putative transporter; Identified by match to protein family HMM PF00496.
       0.560
AEF84836.1
Oligopeptide transport system permease protein AppB; Identified by match to protein family HMM PF00528.
       0.559
AEF83643.1
Oligopeptide transport ATP-binding protein AppF; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
       0.557
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
 
  
 0.539
AEF84674.1
OmpA; Identified by match to protein family HMM PF00691.
 
 
 
 0.475
AEF85414.1
Putative lipoprotein releasing system, permease protein; Identified by match to protein family HMM PF02687.
  
     0.463
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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