STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85014.1Tetratricopeptide repeat domain protein. (590 aa)    
Predicted Functional Partners:
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
  
    0.805
AEF83939.1
Putative membrane protein.
       0.773
AEF87030.1
Putative transporter, major facilitator family; Identified by match to protein family HMM PF07690.
  
     0.766
AEF84244.1
Conserved hypothetical protein.
  
     0.759
AEF84809.1
Putative lipoprotein; Identified by match to protein family HMM PF01833; match to protein family HMM PF01841.
  
     0.736
AEF84981.1
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
 
    0.730
AEF86875.1
Tetratricopeptide repeat domain protein.
  
   
 0.727
AEF85896.1
Fibronectin type III domain protein; Identified by match to protein family HMM PF00041.
  
     0.709
AEF85400.1
Putative BNR domain protein.
  
     0.707
AEF83912.1
22.5 kDa protein.
  
     0.704
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.