Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83762.1 | AEF83875.1 | TREPR_1542 | TREPR_3360 | Rubrerythrin; Identified by match to protein family HMM PF00301; match to protein family HMM PF02915. | Identified by match to protein family HMM PF00753. | 0.659 |
| AEF83762.1 | AEF83906.1 | TREPR_1542 | TREPR_3605 | Rubrerythrin; Identified by match to protein family HMM PF00301; match to protein family HMM PF02915. | Ferric uptake regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family. | 0.581 |
| AEF83762.1 | AEF84285.1 | TREPR_1542 | TREPR_1544 | Rubrerythrin; Identified by match to protein family HMM PF00301; match to protein family HMM PF02915. | Conserved hypothetical protein. | 0.533 |
| AEF83762.1 | AEF84512.1 | TREPR_1542 | TREPR_1543 | Rubrerythrin; Identified by match to protein family HMM PF00301; match to protein family HMM PF02915. | Rubredoxin; Identified by match to protein family HMM PF00301. | 0.862 |
| AEF83762.1 | nifJ | TREPR_1542 | TREPR_1990 | Rubrerythrin; Identified by match to protein family HMM PF00301; match to protein family HMM PF02915. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | 0.446 |
| AEF83875.1 | AEF83762.1 | TREPR_3360 | TREPR_1542 | Identified by match to protein family HMM PF00753. | Rubrerythrin; Identified by match to protein family HMM PF00301; match to protein family HMM PF02915. | 0.659 |
| AEF83875.1 | AEF84512.1 | TREPR_3360 | TREPR_1543 | Identified by match to protein family HMM PF00753. | Rubredoxin; Identified by match to protein family HMM PF00301. | 0.683 |
| AEF83875.1 | AEF84598.1 | TREPR_3360 | TREPR_2723 | Identified by match to protein family HMM PF00753. | IscU protein; Identified by match to protein family HMM PF01592; match to protein family HMM PF04324. | 0.781 |
| AEF83875.1 | nifJ | TREPR_3360 | TREPR_1990 | Identified by match to protein family HMM PF00753. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. | 0.492 |
| AEF83906.1 | AEF83762.1 | TREPR_3605 | TREPR_1542 | Ferric uptake regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family. | Rubrerythrin; Identified by match to protein family HMM PF00301; match to protein family HMM PF02915. | 0.581 |
| AEF83906.1 | AEF84512.1 | TREPR_3605 | TREPR_1543 | Ferric uptake regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family. | Rubredoxin; Identified by match to protein family HMM PF00301. | 0.536 |
| AEF83906.1 | AEF84598.1 | TREPR_3605 | TREPR_2723 | Ferric uptake regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family. | IscU protein; Identified by match to protein family HMM PF01592; match to protein family HMM PF04324. | 0.423 |
| AEF83906.1 | AEF86226.1 | TREPR_3605 | TREPR_3606 | Ferric uptake regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family. | Rubredoxin/rubrerythrin; Identified by match to protein family HMM PF00301; match to protein family HMM PF02915. | 0.703 |
| AEF84285.1 | AEF83762.1 | TREPR_1544 | TREPR_1542 | Conserved hypothetical protein. | Rubrerythrin; Identified by match to protein family HMM PF00301; match to protein family HMM PF02915. | 0.533 |
| AEF84285.1 | AEF84512.1 | TREPR_1544 | TREPR_1543 | Conserved hypothetical protein. | Rubredoxin; Identified by match to protein family HMM PF00301. | 0.542 |
| AEF84512.1 | AEF83762.1 | TREPR_1543 | TREPR_1542 | Rubredoxin; Identified by match to protein family HMM PF00301. | Rubrerythrin; Identified by match to protein family HMM PF00301; match to protein family HMM PF02915. | 0.862 |
| AEF84512.1 | AEF83875.1 | TREPR_1543 | TREPR_3360 | Rubredoxin; Identified by match to protein family HMM PF00301. | Identified by match to protein family HMM PF00753. | 0.683 |
| AEF84512.1 | AEF83906.1 | TREPR_1543 | TREPR_3605 | Rubredoxin; Identified by match to protein family HMM PF00301. | Ferric uptake regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family. | 0.536 |
| AEF84512.1 | AEF84285.1 | TREPR_1543 | TREPR_1544 | Rubredoxin; Identified by match to protein family HMM PF00301. | Conserved hypothetical protein. | 0.542 |
| AEF84512.1 | AEF84598.1 | TREPR_1543 | TREPR_2723 | Rubredoxin; Identified by match to protein family HMM PF00301. | IscU protein; Identified by match to protein family HMM PF01592; match to protein family HMM PF04324. | 0.949 |
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