STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84592.1Ferredoxin; Identified by match to protein family HMM PF00111. (604 aa)    
Predicted Functional Partners:
AEF86217.1
Dimethylamine corrinoid protein; Identified by match to protein family HMM PF02310; match to protein family HMM PF02607.
 
    0.849
AEF83706.1
Conserved hypothetical protein.
 
     0.825
AEF86233.1
Acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma; Identified by match to protein family HMM PF03599; match to protein family HMM PF04060.
 
 
   0.816
AEF84841.1
CO dehydrogenase/acetyl-CoA synthase delta subunit.
 
 
   0.815
AEF86807.1
Uroporphyrinogen decarboxylase (URO-D) superfamily; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family.
 
    0.716
AEF85163.1
Cobalamin B12-binding domain protein; Identified by match to protein family HMM PF02310; match to protein family HMM PF02607.
 
    0.713
AEF83883.1
Uroporphyrinogen decarboxylase; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family.
 
    0.691
AEF86168.1
Dimethylamine corrinoid protein; Identified by match to protein family HMM PF02310; match to protein family HMM PF02607.
 
    0.685
AEF85264.1
Methyl corrinoid protein; Identified by match to protein family HMM PF00809.
 
 
 
 0.672
AEF86154.1
Methyltransferase MtaA/CmuA family; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family.
 
    0.591
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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