Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84178.1 | AEF84884.1 | TREPR_2988 | TREPR_1603 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.883 |
| AEF84178.1 | AEF85417.1 | TREPR_2988 | TREPR_0118 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Putative substrate binding protein; Identified by match to protein family HMM PF01547. | 0.716 |
| AEF84178.1 | AEF85611.1 | TREPR_2988 | TREPR_1444 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Sugar ABC transporter permease; Identified by match to protein family HMM PF00528. | 0.883 |
| AEF84178.1 | AEF86427.1 | TREPR_2988 | TREPR_1601 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | 0.600 |
| AEF84178.1 | AEF86677.1 | TREPR_2988 | TREPR_3845 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Putative sugar ABC-transporter, sugar-binding protein; Identified by match to protein family HMM PF01547. | 0.734 |
| AEF84583.1 | AEF84884.1 | TREPR_1600 | TREPR_1603 | Cellobiose phosphorylase; Identified by match to protein family HMM PF06165; match to protein family HMM PF06205. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.425 |
| AEF84583.1 | AEF85330.1 | TREPR_1600 | TREPR_1604 | Cellobiose phosphorylase; Identified by match to protein family HMM PF06165; match to protein family HMM PF06205. | Beta-mannosidase; Identified by match to protein family HMM PF02837. | 0.754 |
| AEF84583.1 | AEF85630.1 | TREPR_1600 | TREPR_1602 | Cellobiose phosphorylase; Identified by match to protein family HMM PF06165; match to protein family HMM PF06205. | Sugar ABC transporter permease; Identified by match to protein family HMM PF00528. | 0.403 |
| AEF84583.1 | AEF86427.1 | TREPR_1600 | TREPR_1601 | Cellobiose phosphorylase; Identified by match to protein family HMM PF06165; match to protein family HMM PF06205. | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | 0.674 |
| AEF84884.1 | AEF84178.1 | TREPR_1603 | TREPR_2988 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.883 |
| AEF84884.1 | AEF84583.1 | TREPR_1603 | TREPR_1600 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Cellobiose phosphorylase; Identified by match to protein family HMM PF06165; match to protein family HMM PF06205. | 0.425 |
| AEF84884.1 | AEF85330.1 | TREPR_1603 | TREPR_1604 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Beta-mannosidase; Identified by match to protein family HMM PF02837. | 0.778 |
| AEF84884.1 | AEF85417.1 | TREPR_1603 | TREPR_0118 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Putative substrate binding protein; Identified by match to protein family HMM PF01547. | 0.642 |
| AEF84884.1 | AEF85630.1 | TREPR_1603 | TREPR_1602 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Sugar ABC transporter permease; Identified by match to protein family HMM PF00528. | 0.994 |
| AEF84884.1 | AEF85976.1 | TREPR_1603 | TREPR_1609 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Sugar ABC transporter permease; Identified by match to protein family HMM PF00528. | 0.976 |
| AEF84884.1 | AEF86363.1 | TREPR_1603 | TREPR_1443 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Sugar ABC transporter permease; Identified by match to protein family HMM PF00528. | 0.976 |
| AEF84884.1 | AEF86427.1 | TREPR_1603 | TREPR_1601 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | 0.854 |
| AEF84884.1 | AEF86677.1 | TREPR_1603 | TREPR_3845 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Putative sugar ABC-transporter, sugar-binding protein; Identified by match to protein family HMM PF01547. | 0.600 |
| AEF85330.1 | AEF84583.1 | TREPR_1604 | TREPR_1600 | Beta-mannosidase; Identified by match to protein family HMM PF02837. | Cellobiose phosphorylase; Identified by match to protein family HMM PF06165; match to protein family HMM PF06205. | 0.754 |
| AEF85330.1 | AEF84884.1 | TREPR_1604 | TREPR_1603 | Beta-mannosidase; Identified by match to protein family HMM PF02837. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.778 |
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