STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86196.1Hypothetical protein; Identified by glimmer; putative. (444 aa)    
Predicted Functional Partners:
AEF83869.1
Glycosyltransferase, family 2; Identified by match to protein family HMM PF00535.
 
   
 0.922
AEF83781.1
Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534.
  
    0.683
cysS
cysteine--tRNA ligase; Identified by match to protein family HMM PF01406; match to protein family HMM PF09334; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.627
AEF84809.1
Putative lipoprotein; Identified by match to protein family HMM PF01833; match to protein family HMM PF01841.
 
     0.598
argA
Amino-acid N-acetyltransferase; Identified by match to protein family HMM PF00583; match to protein family HMM TIGR01890; Belongs to the acetyltransferase family.
  
  
 0.570
AEF86793.1
Stage II sporulation protein E; Identified by match to protein family HMM PF07228.
       0.567
AEF85244.1
Stage II sporulation protein E; Identified by match to protein family HMM PF07228.
       0.555
AEF83941.1
Conserved hypothetical protein.
 
    0.553
AEF84638.1
Putative uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.532
AEF83655.1
Hypothetical protein; Identified by glimmer; putative; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.526
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.