STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83556.1Conserved hypothetical protein. (429 aa)    
Predicted Functional Partners:
rnfB
Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
  
 0.817
AEF85108.1
ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
  
  
 0.591
AEF86494.1
Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.
       0.542
AEF85855.1
Macrolide export ATP-binding/permease protein MacB; Identified by match to protein family HMM PF00005.
     
 0.539
AEF83635.1
Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.480
AEF84522.1
Bifunctional aspartokinase/homoserine dehydrogenase I; Identified by match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447; match to protein family HMM TIGR00657.
 
  
 0.466
AEF85028.1
Hypothetical protein; Identified by glimmer; putative.
  
     0.408
AEF84502.1
Putative lipoprotein.
  
     0.408
AEF83558.1
Putative polysaccharide biosynthesis/export domain protein; Identified by match to protein family HMM PF02563.
  
     0.408
AEF83894.1
Putative polysaccharide biosynthesis/export domain protein.
  
     0.402
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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