STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85108.1ABC transporter, permease protein; Identified by match to protein family HMM PF02687. (1080 aa)    
Predicted Functional Partners:
AEF85855.1
Macrolide export ATP-binding/permease protein MacB; Identified by match to protein family HMM PF00005.
 
 
 0.979
AEF85112.1
ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.772
AEF83960.1
Zn-finger domain protein.
  
     0.666
AEF86686.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 
 0.634
AEF83893.1
Macrolide export ATP-binding/permease protein MacB 1/2; Identified by match to protein family HMM PF00005.
  
 
 0.634
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
 
 0.634
AEF84820.1
Macrolide export ATP-binding/permease protein MacB; Identified by match to protein family HMM PF00005.
  
 
 0.634
AEF86805.1
Serine/threonine-protein kinase Pkn1; Identified by match to protein family HMM PF03781.
  
  
 0.594
AEF83556.1
Conserved hypothetical protein.
  
  
 0.591
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
 0.584
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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