STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83782.1HmuU protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (334 aa)    
Predicted Functional Partners:
AEF86497.1
Hemin import ATP-binding protein HmuV; Identified by match to protein family HMM PF00005.
 
 
 0.973
AEF85396.1
iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF01497.
 
 
 0.962
AEF84983.1
iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF01497.
 
 
 0.947
AEF86949.1
Hemin import ATP-binding protein HmuV; Identified by match to protein family HMM PF00005.
 
 
 0.887
AEF85399.1
Hemin import ATP-binding protein HmuV; Identified by match to protein family HMM PF00005.
 
 
 0.879
AEF84381.1
iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00005.
 
 
 0.869
AEF84717.1
Periplasmic binding protein; Identified by match to protein family HMM PF01497.
 
 
 0.864
AEF86810.1
Ferric enterobactin transport ATP-binding protein FepC; Identified by match to protein family HMM PF00005.
 
 
 0.849
AEF83873.1
Ferrichrome transport ATP-binding protein FhuC; Identified by match to protein family HMM PF00005.
 
 
 0.836
AEF85476.1
Ferric enterobactin transport ATP-binding protein FepC; Identified by match to protein family HMM PF00005.
 
 
 0.829
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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