Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEF84414.1Putative lipoprotein. (310 aa)    
Predicted Functional Partners:
AEF83688.1
Putative trap dicarboxylate transporter- dctp subunit; Identified by match to protein family HMM PF03480.
 
 
 
 0.970
AEF85762.1
Putative trap dicarboxylate transporter- dctp subunit; Identified by match to protein family HMM PF03480.
 
 
 
 0.946
AEF85991.1
Trap dicarboxylate transporter- dctm subunit; Identified by match to protein family HMM PF04290; match to protein family HMM PF06808; match to protein family HMM TIGR00786.
 
   
 0.821
AEF85659.1
Putative phosphomannomutase; Identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880.
       0.773
AEF86764.1
Trap dicarboxylate transporter, dctm subunit; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786.
 
   
 0.678
AEF85002.1
Putative C4-dicarboxylate-binding protein; Identified by match to protein family HMM PF03480; match to protein family HMM TIGR00787.
 
 
 
 0.639
AEF84157.1
Putative trap dicarboxylate transporter, dctp subunit; Identified by match to protein family HMM PF03480.
 
 
 
 0.624
AEF86140.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02922.
  
    0.601
AEF84883.1
Conserved hypothetical protein.
       0.533
AEF87030.1
Putative transporter, major facilitator family; Identified by match to protein family HMM PF07690.
  
     0.501
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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