STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85588.1Hypothetical protein; Identified by glimmer; putative. (54 aa)    
Predicted Functional Partners:
AEF83988.1
Plasmid stabilization system antitoxin protein; Identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384.
       0.718
AEF84957.1
Conserved plasmid protein; Identified by match to protein family HMM PF05016; match to protein family HMM TIGR02385.
       0.718
AEF84591.1
ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF04392.
       0.697
AEF83617.1
ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
       0.683
AEF86013.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
       0.683
AEF84117.1
Hypothetical protein; Identified by glimmer; putative.
       0.683
AEF83815.1
Conserved hypothetical protein.
       0.683
AEF84795.1
Hypothetical protein; Identified by glimmer; putative.
       0.683
AEF86990.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
       0.497
AEF85339.1
Transcriptional regulator, Crp/Fnr family; Identified by match to protein family HMM PF00027.
       0.411
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.