Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83604.1 | AEF86137.1 | TREPR_1709 | TREPR_1708 | Transcriptional regulator, LuxR family protein; Identified by match to protein family HMM PF00196. | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | 0.813 |
| AEF83604.1 | AEF86297.1 | TREPR_1709 | TREPR_1710 | Transcriptional regulator, LuxR family protein; Identified by match to protein family HMM PF00196. | Hybrid sensory kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02743. | 0.723 |
| AEF83681.1 | AEF84103.1 | TREPR_3326 | TREPR_2509 | Glycerol-3-phosphate ABC transporter; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.884 |
| AEF83681.1 | AEF84406.1 | TREPR_3326 | TREPR_3327 | Glycerol-3-phosphate ABC transporter; Identified by match to protein family HMM PF00528. | Sugar permease; Identified by match to protein family HMM PF00528. | 0.995 |
| AEF83681.1 | AEF85552.1 | TREPR_3326 | TREPR_3843 | Glycerol-3-phosphate ABC transporter; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.881 |
| AEF83681.1 | AEF85787.1 | TREPR_3326 | TREPR_2987 | Glycerol-3-phosphate ABC transporter; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.884 |
| AEF83681.1 | AEF86137.1 | TREPR_3326 | TREPR_1708 | Glycerol-3-phosphate ABC transporter; Identified by match to protein family HMM PF00528. | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | 0.544 |
| AEF83681.1 | AEF86284.1 | TREPR_3326 | TREPR_3844 | Glycerol-3-phosphate ABC transporter; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.765 |
| AEF84103.1 | AEF83681.1 | TREPR_2509 | TREPR_3326 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Glycerol-3-phosphate ABC transporter; Identified by match to protein family HMM PF00528. | 0.884 |
| AEF84103.1 | AEF84178.1 | TREPR_2509 | TREPR_2988 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.884 |
| AEF84103.1 | AEF86137.1 | TREPR_2509 | TREPR_1708 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | 0.553 |
| AEF84103.1 | AEF86284.1 | TREPR_2509 | TREPR_3844 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.883 |
| AEF84103.1 | AEF86696.1 | TREPR_2509 | TREPR_2508 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Sugar ABC transporter permease; Identified by match to protein family HMM PF00528. | 0.972 |
| AEF84178.1 | AEF84103.1 | TREPR_2988 | TREPR_2509 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.884 |
| AEF84178.1 | AEF84406.1 | TREPR_2988 | TREPR_3327 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Sugar permease; Identified by match to protein family HMM PF00528. | 0.884 |
| AEF84178.1 | AEF85552.1 | TREPR_2988 | TREPR_3843 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.884 |
| AEF84178.1 | AEF85787.1 | TREPR_2988 | TREPR_2987 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.994 |
| AEF84178.1 | AEF86137.1 | TREPR_2988 | TREPR_1708 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | 0.548 |
| AEF84406.1 | AEF83681.1 | TREPR_3327 | TREPR_3326 | Sugar permease; Identified by match to protein family HMM PF00528. | Glycerol-3-phosphate ABC transporter; Identified by match to protein family HMM PF00528. | 0.995 |
| AEF84406.1 | AEF84178.1 | TREPR_3327 | TREPR_2988 | Sugar permease; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.884 |
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