STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84060.1Conserved hypothetical protein. (290 aa)    
Predicted Functional Partners:
AEF85077.1
Putative permease, YjgP/YjgQ family; Identified by match to protein family HMM PF03739; overlaps another CDS with the same product name.
 
     0.724
AEF86073.1
Putative permease, YjgP/YjgQ family; Identified by match to protein family HMM PF03739; overlaps another CDS with the same product name.
 
     0.709
dut
dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.664
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
       0.615
AEF85932.1
Identified by match to protein family HMM PF00691.
  
     0.523
AEF86875.1
Tetratricopeptide repeat domain protein.
  
     0.517
AEF85414.1
Putative lipoprotein releasing system, permease protein; Identified by match to protein family HMM PF02687.
 
     0.488
AEF85773.1
Putative lipoprotein releasing system, permease protein; Identified by match to protein family HMM PF02687.
 
     0.485
AEF85133.1
Hypothetical protein; Identified by glimmer; putative.
 
     0.480
AEF84520.1
Hypothetical protein; Identified by glimmer; putative.
  
     0.463
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.