STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85560.1Putative D-aminoacylase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969. (537 aa)    
Predicted Functional Partners:
AEF84980.1
Putative dipeptidase; Identified by match to protein family HMM PF01244.
 
     0.860
AEF86716.1
Xaa-Pro dipeptidase; Identified by match to protein family HMM PF00557; match to protein family HMM PF01321.
 
     0.689
AEF86883.1
Bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.
 
     0.630
AEF83953.1
Oligopeptide transport system permease protein AppC; Identified by match to protein family HMM PF00528.
       0.583
AEF83901.1
Oligopeptide transport system permease protein AppB; Identified by match to protein family HMM PF00528.
       0.568
AEF84642.1
Oligopeptide transport ATP-binding protein AppF; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
       0.518
AEF85500.1
Oligopeptide transport ATP-binding protein AppD; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
       0.518
AEF85877.1
Alanine racemase domain protein; Identified by match to protein family HMM PF01168.
 
   
 0.516
AEF85113.1
MlrC domain protein; Identified by match to protein family HMM PF07364.
 
     0.453
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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