Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83826.1 | AEF84499.1 | TREPR_1799 | TREPR_1796 | Transcriptional regulator, XRE family with cupin sensor; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883. | Pentaglycine interpeptide bridge formation protein; Identified by match to protein family HMM PF02388. | 0.649 |
| AEF83826.1 | AEF84773.1 | TREPR_1799 | TREPR_1800 | Transcriptional regulator, XRE family with cupin sensor; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883. | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | 0.981 |
| AEF83826.1 | AEF85302.1 | TREPR_1799 | TREPR_1797 | Transcriptional regulator, XRE family with cupin sensor; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883. | Hypothetical protein; Identified by glimmer; putative. | 0.649 |
| AEF83826.1 | AEF86535.1 | TREPR_1799 | TREPR_1798 | Transcriptional regulator, XRE family with cupin sensor; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883. | Putative 3-dehydroquinate dehydratase, type 1/shikimate 5-dehydrogenase; Identified by match to protein family HMM PF01487; match to protein family HMM PF01488; match to protein family HMM PF08501. | 0.785 |
| AEF83826.1 | AEF86735.1 | TREPR_1799 | TREPR_1794 | Transcriptional regulator, XRE family with cupin sensor; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883. | ATPase. | 0.459 |
| AEF83826.1 | metG | TREPR_1799 | TREPR_1795 | Transcriptional regulator, XRE family with cupin sensor; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883. | methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.692 |
| AEF84499.1 | AEF83826.1 | TREPR_1796 | TREPR_1799 | Pentaglycine interpeptide bridge formation protein; Identified by match to protein family HMM PF02388. | Transcriptional regulator, XRE family with cupin sensor; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883. | 0.649 |
| AEF84499.1 | AEF84773.1 | TREPR_1796 | TREPR_1800 | Pentaglycine interpeptide bridge formation protein; Identified by match to protein family HMM PF02388. | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | 0.582 |
| AEF84499.1 | AEF85302.1 | TREPR_1796 | TREPR_1797 | Pentaglycine interpeptide bridge formation protein; Identified by match to protein family HMM PF02388. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| AEF84499.1 | AEF86535.1 | TREPR_1796 | TREPR_1798 | Pentaglycine interpeptide bridge formation protein; Identified by match to protein family HMM PF02388. | Putative 3-dehydroquinate dehydratase, type 1/shikimate 5-dehydrogenase; Identified by match to protein family HMM PF01487; match to protein family HMM PF01488; match to protein family HMM PF08501. | 0.658 |
| AEF84499.1 | AEF86735.1 | TREPR_1796 | TREPR_1794 | Pentaglycine interpeptide bridge formation protein; Identified by match to protein family HMM PF02388. | ATPase. | 0.538 |
| AEF84499.1 | metG | TREPR_1796 | TREPR_1795 | Pentaglycine interpeptide bridge formation protein; Identified by match to protein family HMM PF02388. | methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.839 |
| AEF84773.1 | AEF83826.1 | TREPR_1800 | TREPR_1799 | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | Transcriptional regulator, XRE family with cupin sensor; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883. | 0.981 |
| AEF84773.1 | AEF84499.1 | TREPR_1800 | TREPR_1796 | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | Pentaglycine interpeptide bridge formation protein; Identified by match to protein family HMM PF02388. | 0.582 |
| AEF84773.1 | AEF85302.1 | TREPR_1800 | TREPR_1797 | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | Hypothetical protein; Identified by glimmer; putative. | 0.581 |
| AEF84773.1 | AEF86535.1 | TREPR_1800 | TREPR_1798 | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | Putative 3-dehydroquinate dehydratase, type 1/shikimate 5-dehydrogenase; Identified by match to protein family HMM PF01487; match to protein family HMM PF01488; match to protein family HMM PF08501. | 0.732 |
| AEF84773.1 | AEF86735.1 | TREPR_1800 | TREPR_1794 | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | ATPase. | 0.416 |
| AEF84773.1 | metG | TREPR_1800 | TREPR_1795 | Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501. | methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.613 |
| AEF85302.1 | AEF83826.1 | TREPR_1797 | TREPR_1799 | Hypothetical protein; Identified by glimmer; putative. | Transcriptional regulator, XRE family with cupin sensor; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883. | 0.649 |
| AEF85302.1 | AEF84499.1 | TREPR_1797 | TREPR_1796 | Hypothetical protein; Identified by glimmer; putative. | Pentaglycine interpeptide bridge formation protein; Identified by match to protein family HMM PF02388. | 0.773 |
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