STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86962.1Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (143 aa)    
Predicted Functional Partners:
argA
Amino-acid N-acetyltransferase; Identified by match to protein family HMM PF00583; match to protein family HMM TIGR01890; Belongs to the acetyltransferase family.
  
 
 0.932
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
  
 
 0.907
AEF86632.1
Aminotransferase, class I and II; Identified by match to protein family HMM PF00155.
     
 0.903
AEF83830.1
Aspartate aminotransferase; Identified by match to protein family HMM PF00155.
     
 0.903
AEF84095.1
Dead/deah box helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF09369.
  
    0.778
AEF83695.1
YprB.
       0.773
ruvA
Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
       0.673
glgC
Glucose-1-phosphate adenylyltransferase; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR02091.
       0.540
AEF84450.1
Conserved hypothetical protein.
       0.502
AEF86582.1
Peptidase, M22 family; Identified by match to protein family HMM PF00814.
  
 
 0.498
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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