Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84000.1 | AEF85715.1 | TREPR_2489 | TREPR_1854 | Conserved hypothetical protein; Identified by match to protein family HMM PF08308. | XylR; Identified by match to protein family HMM PF03781. | 0.741 |
| AEF84000.1 | AEF85732.1 | TREPR_2489 | TREPR_1855 | Conserved hypothetical protein; Identified by match to protein family HMM PF08308. | Conserved hypothetical protein; Identified by match to protein family HMM PF03781. | 0.450 |
| AEF84000.1 | AEF86117.1 | TREPR_2489 | TREPR_2662 | Conserved hypothetical protein; Identified by match to protein family HMM PF08308. | Hypothetical protein; Identified by glimmer; putative. | 0.456 |
| AEF84075.1 | AEF85397.1 | TREPR_1856 | TREPR_1851 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092. | 0.451 |
| AEF84075.1 | AEF85715.1 | TREPR_1856 | TREPR_1854 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | XylR; Identified by match to protein family HMM PF03781. | 0.586 |
| AEF84075.1 | AEF85732.1 | TREPR_1856 | TREPR_1855 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | Conserved hypothetical protein; Identified by match to protein family HMM PF03781. | 0.586 |
| AEF84075.1 | AEF86141.1 | TREPR_1856 | TREPR_1852 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | Conserved hypothetical protein. | 0.470 |
| AEF84075.1 | AEF86479.1 | TREPR_1856 | TREPR_1853 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | Sigma-70, region 4 family; Identified by match to protein family HMM PF00196; match to protein family HMM PF08281. | 0.571 |
| AEF84557.1 | AEF85397.1 | TREPR_1849 | TREPR_1851 | Hypothetical protein; Identified by glimmer; putative. | Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092. | 0.559 |
| AEF84557.1 | AEF85715.1 | TREPR_1849 | TREPR_1854 | Hypothetical protein; Identified by glimmer; putative. | XylR; Identified by match to protein family HMM PF03781. | 0.432 |
| AEF84557.1 | AEF85732.1 | TREPR_1849 | TREPR_1855 | Hypothetical protein; Identified by glimmer; putative. | Conserved hypothetical protein; Identified by match to protein family HMM PF03781. | 0.432 |
| AEF84557.1 | AEF86141.1 | TREPR_1849 | TREPR_1852 | Hypothetical protein; Identified by glimmer; putative. | Conserved hypothetical protein. | 0.538 |
| AEF84557.1 | AEF86388.1 | TREPR_1849 | TREPR_1850 | Hypothetical protein; Identified by glimmer; putative. | Conserved hypothetical protein. | 0.757 |
| AEF84557.1 | AEF86479.1 | TREPR_1849 | TREPR_1853 | Hypothetical protein; Identified by glimmer; putative. | Sigma-70, region 4 family; Identified by match to protein family HMM PF00196; match to protein family HMM PF08281. | 0.517 |
| AEF84557.1 | AEF86581.1 | TREPR_1849 | TREPR_1847 | Hypothetical protein; Identified by glimmer; putative. | ATP dependent DNA ligase C region family; Identified by match to protein family HMM PF04679. | 0.752 |
| AEF85397.1 | AEF84075.1 | TREPR_1851 | TREPR_1856 | Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092. | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.451 |
| AEF85397.1 | AEF84557.1 | TREPR_1851 | TREPR_1849 | Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092. | Hypothetical protein; Identified by glimmer; putative. | 0.559 |
| AEF85397.1 | AEF85715.1 | TREPR_1851 | TREPR_1854 | Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092. | XylR; Identified by match to protein family HMM PF03781. | 0.654 |
| AEF85397.1 | AEF85732.1 | TREPR_1851 | TREPR_1855 | Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092. | Conserved hypothetical protein; Identified by match to protein family HMM PF03781. | 0.643 |
| AEF85397.1 | AEF86141.1 | TREPR_1851 | TREPR_1852 | Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092. | Conserved hypothetical protein. | 0.950 |
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