STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83744.1Hypothetical protein; Identified by glimmer; putative. (304 aa)    
Predicted Functional Partners:
aepY
Phosphonopyruvate decarboxylase; Identified by match to protein family HMM PF02775; match to protein family HMM TIGR03297.
   
  
 0.802
AEF84623.1
Conserved domain protein; Identified by match to protein family HMM PF00037.
   
    0.796
AEF85126.1
Hypothetical protein; Identified by glimmer; putative.
       0.642
AEF86963.1
N-6 DNA methylase; Identified by match to protein family HMM PF01420; match to protein family HMM PF02384.
  
  
 0.630
AEF84895.1
N-6 DNA methylase; Identified by match to protein family HMM PF02384; match to protein family HMM PF04313.
  
  
 0.630
AEF85818.1
Type I restriction-modification system R subunit; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04313; match to protein family HMM PF04851.
  
  
 0.478
AEF83737.1
Type III restriction enzyme, res subunit; Identified by match to protein family HMM PF00270; match to protein family HMM PF04313; match to protein family HMM PF04851.
  
  
 0.478
AEF84892.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02384; match to protein family HMM PF04313.
  
  
 0.460
AEF85913.1
Leucine Rich Repeat domain protein; Identified by match to protein family HMM PF00560.
       0.444
AEF85475.1
3-methylitaconate isomerase; Identified by match to protein family HMM PF04303.
   
  
 0.418
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.