Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEF85263.1Putative ribokinase; Identified by match to protein family HMM PF00294. (297 aa)    
Predicted Functional Partners:
AEF83971.1
LacI family transcriptional repressor; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.
  
  
 0.782
AEF83603.1
Conserved hypothetical ABC transporter periplasmic solute-binding protein; Identified by match to protein family HMM PF01547.
 
     0.771
AEF85822.1
MgtC/SapB transporter; Identified by match to protein family HMM PF02308.
       0.682
AEF84724.1
Myo-inositol catabolism protein; Identified by match to protein family HMM PF06845.
 
  
 0.631
AEF85038.1
Histidine biosynthesis bifunctional protein hisIE; Identified by match to protein family HMM PF00977; match to protein family HMM PF01502; match to protein family HMM PF01503; match to protein family HMM TIGR03188; Belongs to the HisA/HisF family.
  
    0.631
AEF86385.1
Identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444.
       0.616
AEF86532.1
PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830.
  
  
 0.533
AEF86799.1
Hypothetical protein; Identified by glimmer; putative.
       0.532
AEF84862.1
Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547.
 
    0.521
AEF84571.1
Hypothetical protein; Identified by glimmer; putative.
 
     0.507
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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