Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83603.1 | AEF84772.1 | TREPR_1974 | TREPR_1975 | Conserved hypothetical ABC transporter periplasmic solute-binding protein; Identified by match to protein family HMM PF01547. | Tobe domain family; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.754 |
| AEF83603.1 | AEF85263.1 | TREPR_1974 | TREPR_1971 | Conserved hypothetical ABC transporter periplasmic solute-binding protein; Identified by match to protein family HMM PF01547. | Putative ribokinase; Identified by match to protein family HMM PF00294. | 0.771 |
| AEF83603.1 | AEF86799.1 | TREPR_1974 | TREPR_1973 | Conserved hypothetical ABC transporter periplasmic solute-binding protein; Identified by match to protein family HMM PF01547. | Hypothetical protein; Identified by glimmer; putative. | 0.513 |
| AEF83971.1 | AEF85263.1 | TREPR_1972 | TREPR_1971 | LacI family transcriptional repressor; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Putative ribokinase; Identified by match to protein family HMM PF00294. | 0.787 |
| AEF83971.1 | AEF85822.1 | TREPR_1972 | TREPR_1970 | LacI family transcriptional repressor; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | MgtC/SapB transporter; Identified by match to protein family HMM PF02308. | 0.682 |
| AEF83971.1 | AEF86385.1 | TREPR_1972 | TREPR_1969 | LacI family transcriptional repressor; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444. | 0.610 |
| AEF83971.1 | AEF86799.1 | TREPR_1972 | TREPR_1973 | LacI family transcriptional repressor; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Hypothetical protein; Identified by glimmer; putative. | 0.532 |
| AEF84772.1 | AEF83603.1 | TREPR_1975 | TREPR_1974 | Tobe domain family; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | Conserved hypothetical ABC transporter periplasmic solute-binding protein; Identified by match to protein family HMM PF01547. | 0.754 |
| AEF84772.1 | AEF85263.1 | TREPR_1975 | TREPR_1971 | Tobe domain family; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | Putative ribokinase; Identified by match to protein family HMM PF00294. | 0.401 |
| AEF84772.1 | AEF86799.1 | TREPR_1975 | TREPR_1973 | Tobe domain family; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | Hypothetical protein; Identified by glimmer; putative. | 0.473 |
| AEF85263.1 | AEF83603.1 | TREPR_1971 | TREPR_1974 | Putative ribokinase; Identified by match to protein family HMM PF00294. | Conserved hypothetical ABC transporter periplasmic solute-binding protein; Identified by match to protein family HMM PF01547. | 0.771 |
| AEF85263.1 | AEF83971.1 | TREPR_1971 | TREPR_1972 | Putative ribokinase; Identified by match to protein family HMM PF00294. | LacI family transcriptional repressor; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | 0.787 |
| AEF85263.1 | AEF84772.1 | TREPR_1971 | TREPR_1975 | Putative ribokinase; Identified by match to protein family HMM PF00294. | Tobe domain family; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.401 |
| AEF85263.1 | AEF85822.1 | TREPR_1971 | TREPR_1970 | Putative ribokinase; Identified by match to protein family HMM PF00294. | MgtC/SapB transporter; Identified by match to protein family HMM PF02308. | 0.682 |
| AEF85263.1 | AEF86385.1 | TREPR_1971 | TREPR_1969 | Putative ribokinase; Identified by match to protein family HMM PF00294. | Identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444. | 0.616 |
| AEF85263.1 | AEF86799.1 | TREPR_1971 | TREPR_1973 | Putative ribokinase; Identified by match to protein family HMM PF00294. | Hypothetical protein; Identified by glimmer; putative. | 0.532 |
| AEF85822.1 | AEF83971.1 | TREPR_1970 | TREPR_1972 | MgtC/SapB transporter; Identified by match to protein family HMM PF02308. | LacI family transcriptional repressor; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | 0.682 |
| AEF85822.1 | AEF85263.1 | TREPR_1970 | TREPR_1971 | MgtC/SapB transporter; Identified by match to protein family HMM PF02308. | Putative ribokinase; Identified by match to protein family HMM PF00294. | 0.682 |
| AEF85822.1 | AEF86385.1 | TREPR_1970 | TREPR_1969 | MgtC/SapB transporter; Identified by match to protein family HMM PF02308. | Identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444. | 0.689 |
| AEF85822.1 | AEF86799.1 | TREPR_1970 | TREPR_1973 | MgtC/SapB transporter; Identified by match to protein family HMM PF02308. | Hypothetical protein; Identified by glimmer; putative. | 0.475 |
page 1 of 2