STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84571.1Hypothetical protein; Identified by glimmer; putative. (360 aa)    
Predicted Functional Partners:
AEF86531.1
HAD-superfamily hydrolase, subfamily IA, variant 1; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549.
       0.774
AEF85135.1
Hydrolase; Identified by match to protein family HMM PF00702.
       0.774
AEF86068.1
Identified by match to protein family HMM PF00266; match to protein family HMM PF01053; match to protein family HMM TIGR01977.
    
   0.697
AEF84194.1
Probable cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM TIGR01979; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
   0.697
AEF85314.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
     0.688
AEF83603.1
Conserved hypothetical ABC transporter periplasmic solute-binding protein; Identified by match to protein family HMM PF01547.
 
     0.588
AEF86532.1
PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830.
  
  
 0.563
AEF85263.1
Putative ribokinase; Identified by match to protein family HMM PF00294.
 
     0.508
AEF84772.1
Tobe domain family; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.
       0.477
AEF86946.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
       0.418
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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