Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
nifJPyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. (1187 aa)    
Predicted Functional Partners:
AEF85594.1
2-oxoglutarate oxidoreductase, beta subunit; Identified by match to protein family HMM PF02775.
  
 0.999
vorB
2-oxoglutarate oxidoreductase, alpha subunit; Identified by match to protein family HMM PF01855; match to protein family HMM PF02780.
  
 0.998
AEF84840.1
Indolepyruvate ferredoxin oxidoreductase, beta subunit; Identified by match to protein family HMM PF01558.
  
 
 0.981
pckG
Phosphoenolpyruvate carboxykinase (ATP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.
   
 
 0.981
AEF84370.1
2-oxoglutarate ferredoxin oxidoreductase subunit gamma; Identified by match to protein family HMM PF01558.
  
 
 0.981
AEF85971.1
Acetyl-CoA synthase; Identified by match to protein family HMM PF03598; match to protein family HMM TIGR00316.
  
 
 0.970
rnfB
Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.966
AEF83635.1
Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.966
pta
Phosphate acetyltransferase; Identified by match to protein family HMM PF01515; match to protein family HMM TIGR00651.
   
 0.965
AEF85631.1
Acyl-coenzyme A synthetase ACSM3; Identified by match to protein family HMM PF00501.
  
 
 0.961
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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