STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEF83989.1Cyclic nucleotide-binding protein; Identified by match to protein family HMM PF00027. (391 aa)    
Predicted Functional Partners:
AEF84172.1
Adenylate cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00672.
 
 
 0.763
AEF83563.1
Conserved hypothetical protein.
  
     0.749
AEF85390.1
Conserved hypothetical protein.
  
     0.735
AEF84981.1
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
  
  
 0.732
AEF84491.1
Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226.
 
 
 0.728
AEF85576.1
Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211.
 
 
 0.725
AEF83912.1
22.5 kDa protein.
  
     0.707
AEF85403.1
Conserved hypothetical protein.
 
     0.705
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.674
AEF85952.1
Conserved hypothetical protein.
 
     0.671
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.