STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83930.1Arylacetamide deacetylase (aadac); Identified by match to protein family HMM PF07859. (301 aa)    
Predicted Functional Partners:
AEF86244.1
Conserved hypothetical protein.
 
    0.951
AEF85501.1
Putative membrane protein.
 
     0.948
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.775
rnfB
Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.759
AEF85228.1
Putative peptidase, M16 family; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family.
    
 
 0.750
AEF84084.1
SalB; Identified by match to protein family HMM PF00111.
    
 
 0.725
AEF83921.1
Identified by match to protein family HMM PF00076.
    
   0.715
mtnP
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
 
  
 0.687
AEF85018.1
NADH dehydrogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512.
    
   0.687
hndB3
NAD-dependent formate dehydrogenase beta subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512.
    
   0.687
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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