Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83930.1 | AEF84084.1 | TREPR_2000 | TREPR_1325 | Arylacetamide deacetylase (aadac); Identified by match to protein family HMM PF07859. | SalB; Identified by match to protein family HMM PF00111. | 0.706 |
| AEF83930.1 | AEF84133.1 | TREPR_2000 | TREPR_3286 | Arylacetamide deacetylase (aadac); Identified by match to protein family HMM PF07859. | Fe-hydrogenase gamma subunit; Identified by match to protein family HMM PF01257. | 0.702 |
| AEF83930.1 | AEF85018.1 | TREPR_2000 | TREPR_3287 | Arylacetamide deacetylase (aadac); Identified by match to protein family HMM PF07859. | NADH dehydrogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512. | 0.702 |
| AEF83930.1 | AEF85228.1 | TREPR_2000 | TREPR_0371 | Arylacetamide deacetylase (aadac); Identified by match to protein family HMM PF07859. | Putative peptidase, M16 family; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family. | 0.760 |
| AEF83930.1 | AEF85501.1 | TREPR_2000 | TREPR_2002 | Arylacetamide deacetylase (aadac); Identified by match to protein family HMM PF07859. | Putative membrane protein. | 0.947 |
| AEF83930.1 | AEF86244.1 | TREPR_2000 | TREPR_2001 | Arylacetamide deacetylase (aadac); Identified by match to protein family HMM PF07859. | Conserved hypothetical protein. | 0.949 |
| AEF83930.1 | acpP | TREPR_2000 | TREPR_2690 | Arylacetamide deacetylase (aadac); Identified by match to protein family HMM PF07859. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.815 |
| AEF83930.1 | hndB3 | TREPR_2000 | TREPR_3301 | Arylacetamide deacetylase (aadac); Identified by match to protein family HMM PF07859. | NAD-dependent formate dehydrogenase beta subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512. | 0.702 |
| AEF83930.1 | hndC3 | TREPR_2000 | TREPR_3302 | Arylacetamide deacetylase (aadac); Identified by match to protein family HMM PF07859. | Fe-hydrogenase gamma subunit; Identified by match to protein family HMM PF01257. | 0.702 |
| AEF83930.1 | rnfB | TREPR_2000 | TREPR_0305 | Arylacetamide deacetylase (aadac); Identified by match to protein family HMM PF07859. | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.802 |
| AEF84084.1 | AEF83930.1 | TREPR_1325 | TREPR_2000 | SalB; Identified by match to protein family HMM PF00111. | Arylacetamide deacetylase (aadac); Identified by match to protein family HMM PF07859. | 0.706 |
| AEF84084.1 | AEF84133.1 | TREPR_1325 | TREPR_3286 | SalB; Identified by match to protein family HMM PF00111. | Fe-hydrogenase gamma subunit; Identified by match to protein family HMM PF01257. | 0.732 |
| AEF84084.1 | AEF85018.1 | TREPR_1325 | TREPR_3287 | SalB; Identified by match to protein family HMM PF00111. | NADH dehydrogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512. | 0.869 |
| AEF84084.1 | acpP | TREPR_1325 | TREPR_2690 | SalB; Identified by match to protein family HMM PF00111. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.760 |
| AEF84084.1 | hndB3 | TREPR_1325 | TREPR_3301 | SalB; Identified by match to protein family HMM PF00111. | NAD-dependent formate dehydrogenase beta subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512. | 0.869 |
| AEF84084.1 | hndC3 | TREPR_1325 | TREPR_3302 | SalB; Identified by match to protein family HMM PF00111. | Fe-hydrogenase gamma subunit; Identified by match to protein family HMM PF01257. | 0.732 |
| AEF84084.1 | rnfB | TREPR_1325 | TREPR_0305 | SalB; Identified by match to protein family HMM PF00111. | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.934 |
| AEF84133.1 | AEF83930.1 | TREPR_3286 | TREPR_2000 | Fe-hydrogenase gamma subunit; Identified by match to protein family HMM PF01257. | Arylacetamide deacetylase (aadac); Identified by match to protein family HMM PF07859. | 0.702 |
| AEF84133.1 | AEF84084.1 | TREPR_3286 | TREPR_1325 | Fe-hydrogenase gamma subunit; Identified by match to protein family HMM PF01257. | SalB; Identified by match to protein family HMM PF00111. | 0.732 |
| AEF84133.1 | AEF85018.1 | TREPR_3286 | TREPR_3287 | Fe-hydrogenase gamma subunit; Identified by match to protein family HMM PF01257. | NADH dehydrogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512. | 0.999 |
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