STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85400.1Putative BNR domain protein. (1465 aa)    
Predicted Functional Partners:
AEF85390.1
Conserved hypothetical protein.
  
 
 
 0.817
AEF85382.1
Putative lipoprotein.
 
     0.783
AEF84647.1
Hypothetical protein; Identified by glimmer; putative.
 
     0.778
AEF86386.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
AEF85133.1
Hypothetical protein; Identified by glimmer; putative.
 
 
   0.767
AEF86875.1
Tetratricopeptide repeat domain protein.
  
     0.765
AEF86140.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02922.
  
   0.758
AEF86990.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
  
    0.756
AEF85932.1
Identified by match to protein family HMM PF00691.
  
 
   0.752
AEF83606.1
Putative cell division protein FtsQ; Essential cell division protein.
 
     0.751
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.