Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83746.1 | AEF84004.1 | TREPR_3390 | TREPR_3820 | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | Identified by match to protein family HMM PF02325. | 0.782 |
| AEF83746.1 | AEF84546.1 | TREPR_3390 | TREPR_0849 | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| AEF83746.1 | AEF84987.1 | TREPR_3390 | TREPR_3552 | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.773 |
| AEF83746.1 | AEF85558.1 | TREPR_3390 | TREPR_1003 | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | Putative recombination protein O. | 0.800 |
| AEF83746.1 | AEF85958.1 | TREPR_3390 | TREPR_1191 | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | Conserved hypothetical protein. | 0.749 |
| AEF83746.1 | AEF86798.1 | TREPR_3390 | TREPR_2010 | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family. | 0.618 |
| AEF84004.1 | AEF83746.1 | TREPR_3820 | TREPR_3390 | Identified by match to protein family HMM PF02325. | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | 0.782 |
| AEF84004.1 | AEF84546.1 | TREPR_3820 | TREPR_0849 | Identified by match to protein family HMM PF02325. | Hypothetical protein; Identified by glimmer; putative. | 0.766 |
| AEF84004.1 | AEF84987.1 | TREPR_3820 | TREPR_3552 | Identified by match to protein family HMM PF02325. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.771 |
| AEF84004.1 | AEF85558.1 | TREPR_3820 | TREPR_1003 | Identified by match to protein family HMM PF02325. | Putative recombination protein O. | 0.772 |
| AEF84004.1 | AEF85958.1 | TREPR_3820 | TREPR_1191 | Identified by match to protein family HMM PF02325. | Conserved hypothetical protein. | 0.737 |
| AEF84004.1 | AEF86798.1 | TREPR_3820 | TREPR_2010 | Identified by match to protein family HMM PF02325. | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family. | 0.606 |
| AEF84242.1 | AEF84270.1 | TREPR_2013 | TREPR_2011 | Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| AEF84242.1 | AEF85209.1 | TREPR_2013 | TREPR_2012 | Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547. | Hypothetical protein; Identified by glimmer; putative. | 0.781 |
| AEF84242.1 | AEF86331.1 | TREPR_2013 | TREPR_2016 | Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547. | Putative caudovirus prohead protease; Identified by match to protein family HMM PF04586. | 0.910 |
| AEF84242.1 | AEF86798.1 | TREPR_2013 | TREPR_2010 | Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547. | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family. | 0.572 |
| AEF84270.1 | AEF84242.1 | TREPR_2011 | TREPR_2013 | Hypothetical protein; Identified by glimmer; putative. | Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547. | 0.773 |
| AEF84270.1 | AEF85209.1 | TREPR_2011 | TREPR_2012 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| AEF84270.1 | AEF86331.1 | TREPR_2011 | TREPR_2016 | Hypothetical protein; Identified by glimmer; putative. | Putative caudovirus prohead protease; Identified by match to protein family HMM PF04586. | 0.603 |
| AEF84270.1 | AEF86798.1 | TREPR_2011 | TREPR_2010 | Hypothetical protein; Identified by glimmer; putative. | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family. | 0.495 |
page 1 of 4