STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEF85247.1Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537. (396 aa)    
Predicted Functional Partners:
AEF86331.1
Putative caudovirus prohead protease; Identified by match to protein family HMM PF04586.
     
 0.804
AEF85439.1
Transcriptional regulator, LuxR family protein; Identified by match to protein family HMM PF00196.
       0.773
AEF83766.1
Putative phage capsid family; Identified by match to protein family HMM PF05065.
  
 
 0.740
AEF85984.1
Identified by match to protein family HMM PF03747.
   
   0.696
AEF84242.1
Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547.
     
 0.638
AEF84270.1
Hypothetical protein; Identified by glimmer; putative.
       0.603
AEF85209.1
Hypothetical protein; Identified by glimmer; putative.
       0.603
AEF86364.1
Putative phage capsid family; Identified by match to protein family HMM PF05065.
 
 
 0.504
AEF84886.1
Conserved hypothetical protein; Identified by match to protein family HMM PF08706; match to protein family HMM TIGR01613.
 
   
 0.455
AEF83780.1
Conserved hypothetical protein; Identified by match to protein family HMM PF08706; match to protein family HMM TIGR01613.
 
   
 0.454
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.