Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83766.1 | AEF83780.1 | TREPR_2017 | TREPR_2198 | Putative phage capsid family; Identified by match to protein family HMM PF05065. | Conserved hypothetical protein; Identified by match to protein family HMM PF08706; match to protein family HMM TIGR01613. | 0.406 |
| AEF83766.1 | AEF84242.1 | TREPR_2017 | TREPR_2013 | Putative phage capsid family; Identified by match to protein family HMM PF05065. | Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547. | 0.878 |
| AEF83766.1 | AEF84270.1 | TREPR_2017 | TREPR_2011 | Putative phage capsid family; Identified by match to protein family HMM PF05065. | Hypothetical protein; Identified by glimmer; putative. | 0.459 |
| AEF83766.1 | AEF84886.1 | TREPR_2017 | TREPR_2263 | Putative phage capsid family; Identified by match to protein family HMM PF05065. | Conserved hypothetical protein; Identified by match to protein family HMM PF08706; match to protein family HMM TIGR01613. | 0.400 |
| AEF83766.1 | AEF85209.1 | TREPR_2017 | TREPR_2012 | Putative phage capsid family; Identified by match to protein family HMM PF05065. | Hypothetical protein; Identified by glimmer; putative. | 0.462 |
| AEF83766.1 | AEF85247.1 | TREPR_2017 | TREPR_2014 | Putative phage capsid family; Identified by match to protein family HMM PF05065. | Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537. | 0.749 |
| AEF83766.1 | AEF85439.1 | TREPR_2017 | TREPR_2015 | Putative phage capsid family; Identified by match to protein family HMM PF05065. | Transcriptional regulator, LuxR family protein; Identified by match to protein family HMM PF00196. | 0.578 |
| AEF83766.1 | AEF86331.1 | TREPR_2017 | TREPR_2016 | Putative phage capsid family; Identified by match to protein family HMM PF05065. | Putative caudovirus prohead protease; Identified by match to protein family HMM PF04586. | 0.941 |
| AEF83780.1 | AEF83766.1 | TREPR_2198 | TREPR_2017 | Conserved hypothetical protein; Identified by match to protein family HMM PF08706; match to protein family HMM TIGR01613. | Putative phage capsid family; Identified by match to protein family HMM PF05065. | 0.406 |
| AEF83780.1 | AEF85247.1 | TREPR_2198 | TREPR_2014 | Conserved hypothetical protein; Identified by match to protein family HMM PF08706; match to protein family HMM TIGR01613. | Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537. | 0.467 |
| AEF83780.1 | AEF86364.1 | TREPR_2198 | TREPR_2081 | Conserved hypothetical protein; Identified by match to protein family HMM PF08706; match to protein family HMM TIGR01613. | Putative phage capsid family; Identified by match to protein family HMM PF05065. | 0.425 |
| AEF84242.1 | AEF83766.1 | TREPR_2013 | TREPR_2017 | Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547. | Putative phage capsid family; Identified by match to protein family HMM PF05065. | 0.878 |
| AEF84242.1 | AEF84270.1 | TREPR_2013 | TREPR_2011 | Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| AEF84242.1 | AEF85209.1 | TREPR_2013 | TREPR_2012 | Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547. | Hypothetical protein; Identified by glimmer; putative. | 0.781 |
| AEF84242.1 | AEF85247.1 | TREPR_2013 | TREPR_2014 | Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547. | Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537. | 0.645 |
| AEF84242.1 | AEF85439.1 | TREPR_2013 | TREPR_2015 | Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547. | Transcriptional regulator, LuxR family protein; Identified by match to protein family HMM PF00196. | 0.603 |
| AEF84242.1 | AEF86331.1 | TREPR_2013 | TREPR_2016 | Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547. | Putative caudovirus prohead protease; Identified by match to protein family HMM PF04586. | 0.910 |
| AEF84242.1 | AEF86364.1 | TREPR_2013 | TREPR_2081 | Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547. | Putative phage capsid family; Identified by match to protein family HMM PF05065. | 0.784 |
| AEF84270.1 | AEF83766.1 | TREPR_2011 | TREPR_2017 | Hypothetical protein; Identified by glimmer; putative. | Putative phage capsid family; Identified by match to protein family HMM PF05065. | 0.459 |
| AEF84270.1 | AEF84242.1 | TREPR_2011 | TREPR_2013 | Hypothetical protein; Identified by glimmer; putative. | Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547. | 0.773 |
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