STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEF83766.1Putative phage capsid family; Identified by match to protein family HMM PF05065. (434 aa)    
Predicted Functional Partners:
AEF86331.1
Putative caudovirus prohead protease; Identified by match to protein family HMM PF04586.
 
  
 0.941
AEF84242.1
Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547.
 
    0.879
AEF83892.1
Caudovirus prohead protease; Identified by match to protein family HMM PF04586.
 
  
 0.867
AEF84917.1
Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM PF03237; match to protein family HMM TIGR01547.
 
    0.785
AEF84389.1
Conserved hypothetical protein.
 
     0.773
AEF85320.1
Conserved hypothetical protein.
  
     0.770
AEF86423.1
Identified by match to protein family HMM PF01909.
  
     0.768
AEF84883.1
Conserved hypothetical protein.
  
     0.764
AEF85181.1
Conserved hypothetical protein.
  
     0.758
AEF85534.1
Conserved hypothetical protein.
  
     0.753
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.