STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84647.1Hypothetical protein; Identified by glimmer; putative. (5955 aa)    
Predicted Functional Partners:
AEF85400.1
Putative BNR domain protein.
 
     0.780
AEF86875.1
Tetratricopeptide repeat domain protein.
  
 
 
 0.767
AEF86019.1
Putative Ig domain family; Identified by match to protein family HMM PF00041; match to protein family HMM PF05345.
  
     0.740
AEF86893.1
Putative lipoprotein.
 
     0.693
AEF86990.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
  
    0.680
AEF85390.1
Conserved hypothetical protein.
  
   
 0.657
AEF85932.1
Identified by match to protein family HMM PF00691.
 
 
   0.654
AEF83778.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF04471; match to protein family HMM PF07719; match to protein family HMM PF07720.
 
    0.654
AEF86140.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02922.
  
   0.652
AEF83606.1
Putative cell division protein FtsQ; Essential cell division protein.
 
     0.628
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.