STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85404.1Phage portal protein; Identified by match to protein family HMM PF04860. (409 aa)    
Predicted Functional Partners:
AEF84917.1
Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM PF03237; match to protein family HMM TIGR01547.
     
 0.797
AEF83892.1
Caudovirus prohead protease; Identified by match to protein family HMM PF04586.
     
 0.796
AEF86364.1
Putative phage capsid family; Identified by match to protein family HMM PF05065.
 
 
 
 0.784
AEF84399.1
Two component transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00196; match to protein family HMM PF08281.
       0.773
AEF84126.1
Hypothetical protein; Identified by glimmer; putative.
       0.737
AEF86537.1
Transcriptional regulator, AlpA family; Identified by match to protein family HMM PF05930.
       0.737
AEF85984.1
Identified by match to protein family HMM PF03747.
   
 
 0.709
AEF85316.1
Hypothetical protein; Identified by glimmer; putative.
       0.517
AEF83766.1
Putative phage capsid family; Identified by match to protein family HMM PF05065.
   
 
 0.430
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.